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Gene : CCAT1 Homo sapiens

Name  ? colon cancer associated transcript 1 Cytological Location  8q24.21
Brief Description  colon cancer associated transcript 1
Description  This gene produces a long non-coding RNA that promotes tumor formation and is upregulated in colon cancer and other cancer cell types. This transcript may regulate long range chromosomal interactions, including at the Myc oncoprotein locus. This RNA may also function as a molecular sponge for microRNAs. [provided by RefSeq, Dec 2017]
  • synonyms:
  • CARLO5,
  • CCAT1,
  • CARLo-5,
  • OTTHUMG00000165065,
  • CARLo-5,
  • onco-lncRNA-40,
  • NR_108049,
  • onco-lncRNA-40,
  • HGNC:45128,
  • uc003ysa.4,
  • colon cancer associated transcript 1 (non-protein coding),
  • HM358356,
  • AK125310
  • identifiers:
  • 100507056,
  • CCAT1

Genome feature

Region: gene ? Length: 11887  
Location: 8:127207382-127219268 reverse strand Cyto location: 8q24.21

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0 Pathways

Gene --> GO terms.

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


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Gene --> Proteins.


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0 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


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Gene --> Physical and Genetic Interactions


Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

Gene --> GO terms.



0 Pathways

0 SN Ps

4 Cross References

6 Data Sets

0 Homologues

0 Located Features

0 Rna Seq Results