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Gene : COL1A1 Homo sapiens

Name  ? collagen type I alpha 1 chain Cytological Location  17q21.33
Brief Description  collagen type I alpha 1 chain
Description  This gene encodes the pro-alpha1 chains of type I collagen whose triple helix comprises two alpha1 chains and one alpha2 chain. Type I is a fibril-forming collagen found in most connective tissues and is abundant in bone, cornea, dermis and tendon. Mutations in this gene are associated with osteogenesis imperfecta types I-IV, Ehlers-Danlos syndrome type VIIA, Ehlers-Danlos syndrome Classical type, Caffey Disease and idiopathic osteoporosis. Reciprocal translocations between chromosomes 17 and 22, where this gene and the gene for platelet-derived growth factor beta are located, are associated with a particular type of skin tumor called dermatofibrosarcoma protuberans, resulting from unregulated expression of the growth factor. Two transcripts, resulting from the use of alternate polyadenylation signals, have been identified for this gene. [provided by R. Dalgleish, Feb 2008]
  • synonyms:
  • Z74615,
  • EDSC,
  • collagen, type I, alpha 1,
  • OTTHUMG00000148674,
  • HGNC:2197,
  • OI3,
  • OI1,
  • COL1A1,
  • CAFYD,
  • NM_000088,
  • OI4,
  • OI4,
  • uc002iqm.4,
  • OI2
  • identifiers:
  • 1277,
  • ENSG00000108821,
  • COL1A1

Genome feature

Region: gene ? Length: 17554  
Location: 17:50184096-50201649 reverse strand Cyto location: 17q21.33

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Gene --> GO terms.

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


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Gene --> Chromosomal location.

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Gene --> Proteins.


Gene Report --> GWAS hit


7 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


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Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

Gene --> GO terms.



208 SN Ps

5 Cross References

19 Data Sets

6 Homologues

1 Located Features

97 Rna Seq Results