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Gene : HMGA1 Homo sapiens

Name  ? high mobility group AT-hook 1 Cytological Location  6p21.31
Brief Description  high mobility group AT-hook 1
Description  This gene encodes a chromatin-associated protein involved in the regulation of gene transcription, integration of retroviruses into chromosomes, and the metastatic progression of cancer cells. The encoded protein preferentially binds to the minor groove of AT-rich regions in double-stranded DNA. Multiple transcript variants encoding different isoforms have been found for this gene. Pseudogenes of this gene have been identified on multiple chromosomes. [provided by RefSeq, Jan 2016]
  • synonyms:
  • AF176039,
  • OTTHUMG00000014539,
  • HMGIY,
  • high-mobility group (nonhistone chromosomal) protein isoforms I and Y,
  • NM_145899,
  • HMG-R,
  • uc003oit.4,
  • HMGIY,
  • HGNC:5010,
  • HMGA1,
  • HMGA1A
  • identifiers:
  • 3159,
  • ENSG00000137309,
  • HMGA1

Genome feature

Region: gene ? Length: 9359  
Location: 6:34236873-34246231 Cyto location: 6p21.31


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Function

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Gene -> HPO annotation (Human Phenotype Ontology)

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Genomics

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Proteins

Gene --> Proteins.

SNPs

Gene Report --> GWAS hit

Disease

1 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]

Homology

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Expression

Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

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Other

108 SN Ps

5 Cross References

19 Data Sets

6 Homologues

0 Located Features

97 Rna Seq Results