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Gene : COLCA1 Homo sapiens

Name  ? colorectal cancer associated 1 Cytological Location  11q23.1
Brief Description  colorectal cancer associated 1
Description  This gene encodes a transmembrane protein that localizes to granular structures, including crystalloid eosinophilic granules and other granular organelles. This gene, along with an overlapping opposite strand gene, has been implicated as a susceptibility locus for colorectal cancer. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Nov 2014]
  • synonyms:
  • CASC12,
  • C11orf92,
  • NM_001302644,
  • OTTHUMG00000166658,
  • cancer susceptibility candidate 12,
  • COLCA1,
  • FLJ45803,
  • chromosome 11 open reading frame 92,
  • C11orf92,
  • AK127703,
  • HGNC:33789,
  • CASC12,
  • LOH11CR1F
  • identifiers:
  • 399948,
  • ENSG00000196167,
  • COLCA1

Genome feature

Region: gene ? Length: 11660  
Location: 11:111293389-111305048 reverse strand Cyto location: 11q23.1


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Function

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0 Pathways

Gene --> GO terms.

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]

Genomics

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Gene --> Chromosomal location.

Gene --> GO terms.

Gene --> Overlapping genes.

Proteins

Gene --> Proteins.

SNPs

Gene Report --> GWAS hit

Disease

0 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]

Homology

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Expression

Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

Gene --> GO terms.

 

Other

0 Pathways

3753 SN Ps

4 Cross References

9 Data Sets

0 Homologues

0 Located Features

54 Rna Seq Results