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Gene : ATXN8OS Homo sapiens

Name  ? ATXN8 opposite strand lncRNA Cytological Location  13q21.33
Brief Description  ATXN8 opposite strand lncRNA
Description  This gene is an antisense transcript to the KLHL1 gene (homolog to the Drosophila KELCH gene); it does not itself appear to be protein coding. A TAC/TGC trinucleotide repeat expansion that is incorporated into this gene transcript, but not the KLHL1 transcript, causes spinocerebellar ataxia type 8. Presumably the expansion interferes with normal antisense function of this transcript. [provided by RefSeq, Oct 2008]
  • synonyms:
  • HGNC:10561,
  • NCRNA00003,
  • SCA8,
  • spinocerebellar ataxia 8,
  • NR_002717,
  • OTTHUMG00000017057,
  • uc010aej.2,
  • KLHL1AS,
  • NCRNA00003,
  • SCA8,
  • non-protein coding RNA 3,
  • AF126749,
  • ATXN8 opposite strand (non-protein coding),
  • kelch-like 1 antisense (Drosophila),
  • ATXN8OS,
  • KLHL1AS
  • identifiers:
  • 6315,
  • ENSG00000230223,
  • ATXN8OS

Genome feature

Region: gene ? Length: 32541  
Location: 13:70107213-70139753 Cyto location: 13q21.33


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Function

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0 Pathways

Gene --> GO terms.

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]

Genomics

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Gene --> Chromosomal location.

Gene --> GO terms.

Gene --> Overlapping genes.

Proteins

Gene --> Proteins.

SNPs

Gene Report --> GWAS hit

Disease

2 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]

Homology

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Gene --> Orthologues

Interactions

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Gene --> Physical and Genetic Interactions

Expression

Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

Gene --> GO terms.

 

Other

0 Pathways

431 SN Ps

4 Cross References

11 Data Sets

0 Homologues

0 Located Features

54 Rna Seq Results