help  | about  | cite  | software

Gene : COL21A1 Homo sapiens

Name  ? collagen type XXI alpha 1 chain Cytological Location  6p12.1|6p12.3-p11.2
Brief Description  collagen type XXI alpha 1 chain
Description  This gene encodes the alpha chain of type XXI collagen, a member of the FACIT (fibril-associated collagens with interrupted helices) collagen family. Type XXI collagen is localized to tissues containing type I collagen and maintains the integrity of the extracellular matrix. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]
  • synonyms:
  • NM_001318751,
  • collagen, type XXI, alpha 1,
  • HGNC:17025,
  • AF330693,
  • OTTHUMG00000014907,
  • FP633,
  • COL21A1,
  • COLA1L,
  • uc003pcs.4
  • identifiers:
  • 81578,
  • ENSG00000124749,
  • COL21A1

Genome feature

Region: gene ? Length: 337539  
Location: 6:56056590-56394128 reverse strand Cyto location: 6p12.1|6p12.3-p11.2

Uni Prot Comments Displayer

Protein Atlas Displayer

Gene Expression Atlas Tissues Displayer

Gene Expression Atlas Diseases Displayer

Publication Counts Displayer

Curated Proteins Displayer


Gene Ontology Displayer

Gene --> GO terms.

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


J Browse Displayer

Gene Structure Displayer

Overlapping Features Displayer

Mouse Alleles Displayer

Gene --> Chromosomal location.

Gene --> GO terms.

Gene --> Overlapping genes.


Gene --> Proteins.


Gene Report --> GWAS hit


0 Diseases

Gene (Hum OR Rat) --> Mouse Allele (Phenotype)

Gene --> Alleles and Disease (clinVar data)

Gene -> HPO annotation (Human Phenotype Ontology)

Mouse Gene --> Allele [Phenotype]


Homologue Displayer


Cytoscape Network Displayer

Gene --> Physical and Genetic Interactions


Gene(s) --> Significant SNPs (GTex data)

Gene Ontology

Gene --> GO terms.



3740 SNPs

4 Cross References

13 Data Sets

0 Homologues

0 Located Features

97 Rna Seq Results